Daily newsletter, 8 Nov 2026

Microregistrar Infection Newsletter
Prepared for microregistrar.com, microregistrar.moodlecloud.com and Infection Institute

Microregistrar Infection Newsletter · Sunday 8 November 2026

England confirms HPAI H5N1 in commercial poultry near Garstang and Pocklington.

Defra and APHA updated the England bird-flu situation page at 19:18 GMT on 7 November 2026. Highly pathogenic avian influenza (HPAI) H5N1 was confirmed that day in commercial poultry near Garstang, Wyre, Lancashire (AIV 2026/24) and near Pocklington, East Riding of Yorkshire (AIV 2026/25). A 3 km protection zone and 10 km surveillance zone have been declared around each premises, and all poultry on both sites will be humanely culled.

Yesterday’s issue still had this page unchanged after Brigg, North Lincolnshire (AIV 2026/23; last public update 4 Nov 19:59 GMT). The England page’s risk-level wording was last rewritten on 21 October and was not changed in the 7 November update. Ebola is not the lead today (it led yesterday, 7 Nov; previous Ebola lead 24 Oct). WHO DON625 is unchanged (10,668 confirmed cases / 5,198 deaths in DRC as of 3 Nov). Africa CDC this morning condemned a 5 November attack in North Kivu that it said led Ebola patients to flee — see Agencies, and do not merge any later-cut tallies with DON625.

Check before quoting: quote Defra/APHA case identifiers (AIV 2026/24 and 2026/25) from the England situation page. Ebola totals still conflict across WHO DON625 (to 3 Nov: 10,668 / 5,198), UKHSA outbreaks-under-monitoring week 44 (to 1 Nov: 10,532 / 5,126) and ECDC’s later-cut page (as of 5 Nov / data to 4 Nov: 10,741 / 5,230) — do not merge. Compilation cut-off early morning — see metadata. Journals omitted (Journal Watch).

Audience: UK/EU clinical ID, AMS, IPC and FRCPath trainees · Window: 7 Nov 2026 ~08:10 GMT → early morning 8 Nov 2026 (Saturday → Sunday; heavy X check). Shortened morning window: gathering finished before the nominal 08:10 cut-off for a 07:00 publication. · Compiled: 8 Nov 2026 06:25 Europe/London (GMT)

4
New or materially updated agency / outbreak / guidance items (England H5N1 AIV 2026/24 and 2026/25; JCVI chikungunya catch-up; MenB PGD v9 catch-up; Africa CDC North Kivu statement)
1
New Microregistrar Moodle row since the 7 Nov issue (7 Nov: Staph aureus bacteraemia)
1/9
Core watched UK pages with something new beyond yesterday (England bird-flu situation) — plus 9/9 Friday-scan sources checked
79
Source links in this issue
1
GOV.UK weekly health-protection digest used for catch-up (arrived 7 Nov 09:23 GMT; no separate Mail Sorter forward in the window)
10
Coverage gaps we could not close

Counted without journals (Journal Watch owns journals from 5 Nov 2026). The agency tally is the 7 Nov England H5N1 confirmations, the 6 Nov JCVI chikungunya update and MenB PGD v9 (important catch-up not used yesterday), and Africa CDC’s 8 Nov North Kivu statement. Flu week 45, DON625/624, the UK Ebola medevac, MHRA Co-Amoxiclav and devolved week-44 respiratory reports are carried as context, not re-counted as new.

Also today

The other headlines from today’s issue. Each card links to its source and to the full summary.

JCVI · chikungunya

IXCHIQ withdrawn; only Vimkunya now UK-authorised

JCVI advice updated 6 Nov: MHRA withdrew IXCHIQ’s UK marketing authorisation on 20 Oct after serious adverse events in older adults. Vimkunya (a VLP vaccine) is the only remaining UK-authorised option.

JCVI advice ›

UKHSA · MenB PGD

MenB PGD template v9.0 adds Trumenba for selected secondary cases

Added on GOV.UK 6 Nov; valid 1 December 2026 to 1 December 2029. Trumenba may be used where the infecting strain is confirmed or predicted not to be covered by Bexsero. Not for the routine childhood programme.

PGD template ›

Moodle · new

Staph aureus bacteraemia added on 7 Nov

New top row on the MoodleCloud sheet since yesterday’s issue. The two 4 Nov rows (S. capitis / NRCS-A and S. saprophyticus) remain immediately below.

Sheet ›

Africa CDC · Ebola

North Kivu attack: Ebola patients said to have fled

Statement dated 8 Nov (05:52 GMT) condemning a 5 Nov attack in Cantine-Aloya, North Kivu. Africa CDC said patients, including hundreds with confirmed or suspected Ebola, fled. No new case totals.

Africa CDC ›

ECDC · tally conflict

Later-cut DRC tally: 10,741 / 5,230

ECDC multi-country page (updated 6 Nov) cites 10,741 confirmed cases and 5,230 deaths as of 5 Nov (data to 4 Nov) — higher than DON625 (to 3 Nov). Quote the source and date you mean.

ECDC ›

What we could not confirm

Shortened morning window (cut-off 06:25 Europe/London, not 08:10). Ebola tallies still conflict across WHO DON625, UKHSA OUM week 44 and ECDC’s later-cut page. Infectious Disease Advisor “Weekly Handoff” still not found. CDC HAN remains Access Denied / 403. ECDC CDTR still week 42. No separate MHRA IXCHIQ withdrawal notice was opened beyond the JCVI/DHSC wording. Journals intentionally omitted.

Microregistrar Moodle update

Read from the MoodleCloud Google Sheet Index tab (“Whats new?” column) on the morning of 8 Nov. One new dated row since yesterday’s issue. Titles are copied as shown on the sheet; the Moodle activity pages were not opened.

Moodle · 7 Nov 2026 · new

Staph aureus bacteraemia

New top “Whats new?” row, dated 7/11/2026 on the sheet (wording: “Staph aureus bacteraemia”). Moodle › · Sheet ›

Moodle · 4 Nov 2026 · already reported

Staph capitis and NRCS-A

Still the second row (sheet wording: “Staph capitis and NRCS-A”). Moodle › · Sheet ›

Moodle · 4 Nov 2026 · already reported

Staph saprophyticus

Third row; unchanged. Moodle › · Sheet ›

Moodle · 31 Oct 2026 · already reported

C. diphtheriae & C. ulcerans Interactive

Still listed below the November entries (sheet wording: “C diphtheriae & C ulcerans Interactive”). Moodle ›

Moodle · 30 Oct 2026 · already reported

Greenbook vaccine part 1 revision

Unchanged. Moodle ›

Watched pages

Core UK watched pages re-checked on the morning of 8 Nov (before 06:25), plus the nine user-approved Friday-scan sources (now daily). Material new items are expanded in Agencies.

Flu/COVID surveillance: still week 45 (5 Nov) — no week 46 yet. Carried from earlier issues; not re-led. Week 45 › · Collection ›

Syndromic surveillance: still week 44 (5 Nov); next due 12 Nov. Week 44 ›

Outbreaks under monitoring: still week 44 (ending 1 Nov). Tallies superseded for quoting by WHO DON625 (to 3 Nov) and now also by ECDC’s later cut (to 4 Nov). Week 44 ›

HCID country risk: still last change note 5 Nov (Guinea, Hungary, Myanmar) — no newer timestamp this morning. HCID ›

Ebola / Marburg outbreak locations: still last updated 5 Nov 15:30 GMT. Locations ›

Bird flu (England): updated 7 Nov 19:18 GMT — HPAI H5N1 confirmed near Garstang (AIV 2026/24) and Pocklington (AIV 2026/25). Brigg AIV 2026/23 remains listed. Situation ›

Green Book / ch25: collection still newest at pneumococcal chapter 25 (3 Nov 08:37 GMT); no newer chapter spotted. Collection ›

MHRA alerts: newest remain the 5 Nov Class 4 Co-Amoxiclav and Class 3 Tropicamide pair; no 6–8 Nov alert. FSN list still 26–30 Oct. Alerts ›

UK SMI / NICE / exams / measles England / HPR: no newer SMI issue, NICE infection guideline, exam notice, England measles epi update (last 15 Oct) or HPR numbered issue beyond issue 10 (29 Oct). UK SMI › · NICE ›

Friday-scan nine (all checked): PHS still the 5 Nov week 44 report (next due 12 Nov); PHW still week 44 PDF; NI respiratory page last reviewed 5 Nov (no new bulletin); HPSC Ireland still integrated week 44 (5 Nov) — headline figures extracted today (see Agencies); ERVISS/ECDC — no newer dated summary than previously noted; EUCAST news newest retained items late Oct (voriconazole rationale 29 Oct; VetCAST consultation 28 Oct); SAPG — no new dated November update; HIS news still 6 Nov members’ survey (not IPC guidance); PAHO — newest epi update still dengue/chikungunya 20 Oct.

Agencies & guidance

Defra/APHA, JCVI/UKHSA immunisation updates, Africa CDC, ECDC tally comparison, and other agency items. Each card links to the primary page we used.

England · avian influenza (lead)

Defra / APHA · H5N1 · lead

HPAI H5N1 confirmed near Garstang and Pocklington (7 Nov)

The England situation page was last updated 7 November 2026, 19:18:29 GMT. Its changelog and “Latest situation” section both state that HPAI H5N1 was confirmed on 7 November in commercial poultry near Garstang, Wyre, Lancashire (AIV 2026/24) and near Pocklington, East Riding of Yorkshire (AIV 2026/25). Dedicated case pages were first published the same evening (Garstang 19:10:15 GMT; Pocklington 19:12:47 GMT). For each premises a 3 km protection zone and 10 km surveillance zone have been declared, and “All poultry on the premises will be humanely culled.” The 4 November Brigg, North Lincolnshire case (AIV 2026/23) remains listed, as does the earlier Biggar, Scottish Borders case (AIV 2026/22). Risk-level wording on the England page was last changed on 21 October 2026 and was not rewritten in the 7 November update.

As printed: the 7 November changelog uses a singular verb (“has been declared around the premises”) for both new cases together; the “Latest situation” section splits them (Garstang “have been declared”; Pocklington “has been declared”). The official title and body for AIV 2026/25 also print “East Riding of Yorkshire, East Riding of Yorkshire” twice.

England situation › · AIV 2026/24 Garstang › · AIV 2026/25 Pocklington ›

UK immunisation / travel (catch-up, 6 Nov)

JCVI / DHSC · chikungunya

IXCHIQ UK marketing authorisation withdrawn; only Vimkunya remains

The JCVI advice page for UK travellers was updated 6 November 2026, 11:00 GMT (not used in yesterday’s issue). The landing-page changelog reads: “Updated to remove the IXCHIQ® vaccine from the advice after the MHRA withdrew its UK marketing authorisation. The only vaccine to protect against chikungunya authorised in the UK is the Vimkunya® vaccine.” The HTML advice itself states that on 20 October 2026, following a review by the Commission on Human Medicines, MHRA withdrew the UK marketing authorisation for the IXCHIQ live-attenuated chikungunya vaccine after reports of a number of serious adverse events in older adults. Vimkunya is described as a non-live virus-like particle (VLP) vaccine, approved by MHRA in May 2025 for people aged 12 and over (marketing authorisation holder Bavarian Nordic). JCVI “does not consider it necessary to advise additional restrictions on the use of Vimkunya®” because the safety signal has only been associated with IXCHIQ. Trial figures printed on the page: 98% seroresponse at 22 days in people aged 12–64 years, falling to 86% at 6 months; in adults over 65 years, 87% at 22 days and 76% at 6 months. JCVI noted a lack of data in pregnancy. Advice (travel sub-committee February 2025; JCVI June 2025): Vimkunya may be considered, alongside bite-avoidance, for people aged 12 and over travelling to regions with active CHIKV outbreaks; long-term or frequent travellers to regions with CHIKV transmission in the past 5 years; and laboratory staff working with CHIKV. No separate MHRA withdrawal notice was opened for this issue — the withdrawal wording is taken from these JCVI/DHSC pages only.

HTML advice › · Landing page ›

UKHSA · MenB PGD

MenB PGD template version 9.0 (valid from 1 December 2026)

GOV.UK updated the template page on 6 November 2026, 09:43 GMT (changelog: “Added version 9, see page 4 for change history”). The page says the PGD supports administration of MenB vaccine to individuals from 8 weeks of age eligible for the national routine programme and to individuals for prevention of secondary cases of meningococcal group B disease. It has been updated to include Trumenba (f rLP2086) as an alternative to Bexsero where the infecting strain is confirmed or predicted not to be covered by Bexsero. Trumenba is not used for the national routine childhood programme. Version 9.0 is valid from 1 December 2026 to 1 December 2029. Practitioners “must not use this PGD template until it has been authorised in Section 2.”

The downloaded v9.0 Word file (gateway GOV-20975) gives cover fields Version v9.0, valid from 1 December 2026, review date 30 June 2028, expiry 1 December 2029. Its change-history row for V9.0 is dated 30 September 2026 (not the 6 November GOV.UK publication date). It adds Trumenba for selected secondary-case prevention; notes that Trumenba is not licensed for people under 10 years and is not recommended under one year; and, when Trumenba is recommended in an outbreak, prints a schedule of 2 doses at least 4 weeks apart (irrespective of prior Bexsero), with the first dose as soon as possible. Header XML in the file contains the words “Pending Ratification”.

Date inconsistency: GOV.UK added version 9 on 6 November 2026, while the document’s own change-history date for V9.0 is 30 September 2026. The page URL slug still says “bexsero” even though v9.0 also covers selected Trumenba use.

PGD page › · v9.0 Word file ›

UKHSA · COVID vaccine · change note

COVID-19 HCP information page — change now specified

The page itself is unchanged since yesterday (still Updated 6 November 2026, 13:41 GMT). The GOV.UK weekly health-protection digest that arrived on 7 Nov now supplies the missing change note: “Clarification of references to Boxes 1, 2 and 3 in the COVID-19 Green Book chapter throughout.” Not a new update today.

HCP information ›

Ebola / WHO / Africa CDC / ECDC

Africa CDC · North Kivu · 8 Nov

Statement on the attack in Cantine-Aloya, North Kivu

Africa CDC published a statement on 8 November 2026 at 05:52 GMT (dateline Addis Ababa, 8 November 2026). It “strongly condemns the deadly attack on civilians in Cantine-Aloya, North Kivu, DRC, on 5 November 2026, reportedly carried out by the Allied Democratic Forces (ADF).” It said the attack “comes at a critical moment in the response to the ongoing Ebola outbreak,” that health facilities have been attacked, and that patients, “including hundreds people with confirmed or suspected Ebola infection, have fled in search of safety” (wording as printed). It warned that interruptions to patient care, contact tracing and surveillance create additional risks, and called for a “corridor of peace,” protection of civilians, patients, health workers and health facilities, and respect for healthcare under international humanitarian law. The statement did not give new confirmed-case or death totals. It is Ebola-response/security context, not a new epidemiological sitrep, and is not today’s lead.

Africa CDC statement › · French version ›

WHO · DON625 · carried

Bundibugyo virus disease — DRC, Kenya and Nigeria (unchanged)

No newer DON this morning (DON626–628 all 404). DON625 remains as published 6 Nov 20:42 GMT (last modified 20:54 GMT). As of 3 Nov 2026: 10,668 confirmed cases and 5,198 deaths in DRC (CFR 48.7%); 2,881 recoveries; 67 health zones / 8 provinces; 51 zones with cases in the preceding 21 days. +964 confirmed / +511 deaths since DON622. No new Kenya or Nigeria cases since DON622. WHO still notes UK and Swiss medical evacuations of confirmed cases among citizens, advises against travel or trade restrictions, and says the rapid risk assessment is being revised.

DON625 ›

ECDC · later cut · tally conflict

Multi-country outbreak page: 10,741 / 5,230 as of 5 Nov

ECDC’s multi-country Ebola page was last updated “6 November at 16.10” (before yesterday’s compilation; not used in that issue). It states that as of 5 November 2026 DRC has reported 10,741 confirmed cases, including 5,230 related deaths (from data up until 4 November) — +73 cases and +32 deaths versus DON625’s 3 November cut. Same eight provinces, explicitly including Nord Ubangi. Kenya: as of 26 October, nine confirmed cases including two deaths, all linked to the first case; last case 20 October; second death 23 October. Nigeria: case reported 20 October and medically evacuated to Switzerland; as of 4 November, 62 contacts under follow-up. EU/EEA: four cases since May 2026 linked to the DRC outbreak (three medically evacuated — two to Germany, one to the Netherlands — and a fourth reported in France in July), all in people working in healthcare or humanitarian roles in affected areas of DRC. Risk language is unchanged: likelihood of infection for EU/EEA people living in or travelling to affected areas estimated as low; for people living in the EU/EEA, very low. Do not present 10,741 / 5,230 as a WHO figure.

ECDC multi-country page ›

UKHSA · Ebola · carried

UK doctor at the Royal Free — unchanged

No newer UKHSA news or blog than the 5 Nov primary confirmation (news 19:47 GMT; companion blog the same day). Public risk remains described as low. Ebola/Marburg locations and HCID pages still timestamped 5 Nov 15:30 GMT.

GOV.UK news › · UKHSA blog ›

Devolved UK / Ireland respiratory

PHS · week 44 · carried

Scotland: still the 5 Nov report

No week 45. Next report due 12 November 2026. Unchanged reminder: influenza activity rising; hospital admissions 207 (from 178); COVID medium; RSV baseline (data 26 Oct–1 Nov).

PHS report ›

PHW · week 44 · carried

Wales: still week 44 (influenza circulating)

No week 45 PDF found. Latest report remains week 44 ending 1 November 2026.

Week 44 PDF › · Collection ›

HPSC · week 44 · figures extracted

Ireland integrated bulletin week 44 — headline figures now extracted

Not a new bulletin (still published 5 Nov 2026; no week 45; the bulletin says it is currently published fortnightly). Yesterday listed it without digitising the tables. Prepared 05/11/2026 for ISO week 44 (26/10/2026–01/11/2026). Printed caveat: data “may be impacted due to ongoing industrial action” since 30 September 2026, and bed-occupancy data are incomplete for the same reason.

Key messages as printed: influenza activity “stabilised and remained at baseline-low levels overall”; RSV increased slightly but remained baseline-low; COVID-19 increased but remained low-moderate; rhino/enterovirus detections high, particularly in paediatrics. Sentinel GP ARI 56.6/100,000 (below baseline; highest in 0–4 years: 223.9/100,000); sentinel GP ILI 9.9/100,000 (below baseline). Influenza positivity 14%; SARS-CoV-2 12%; rhino/enterovirus 21%. COVID-19: 191 cases, 79 hospitalisations in week 44 (incidence 3.7/100,000). Influenza: 123 cases, 33 hospitalisations (incidence 2.4/100,000); influenza A(H1)pdm09 accounted for most subtyped influenza A viruses season to date. RSV: 18 cases, five hospitalisations. No overall excess all-cause mortality from week 40 2026 onwards (EuroMOMO, deaths registered to 1 November 2026).

Week 44 bulletin › · Index ›

NI PHA · unchanged

Respiratory surveillance page last reviewed 5 Nov

No separate new week-numbered bulletin extracted beyond the standing page.

NI PHA ›

CDC / ECDC / EUCAST / HIS / PAHO / SAPG

CDC · measles · unchanged

US 2026 total still 5,182 as of 5 Nov

CDC measles page last updated 6 November 2026; data as of 12:00 on Thursday 5 November. Confirmed total 5,182 — the same figure yesterday reported via CIDRAP. Official 2026 US measles deaths printed as 4* (subject to change). 5,164 of 5,182 from 47 jurisdictions; 18 among international visitors; 96% outbreak-associated. No newer weekly refresh this morning (next typically Thursday 12 Nov).

CDC measles data ›

ECDC · CDTR · unchanged

CDTR archive still week 42

Weeks 43–45 still missing. ERVISS ECDC landing still dated 9 October; erviss.org retrieved but no week number or headline indicators could be extracted from the static HTML.

CDTR › · ERVISS ›

EUCAST · unchanged

No newer clinical breakpoint tables in window

News page: voriconazole rationale v4.1 (29 Oct); VetCAST breakpoint tables public consultation (28 Oct). Paediatric dosages table proposal still lists a comments deadline of 27 November 2026. No 6–8 Nov breakpoint release.

EUCAST news › · Breakpoint tables ›

HIS · unchanged

Newest news still 6 Nov members’ survey

No newer HIS news or newly dated IPC guideline on the topic listing this morning.

HIS news › · Guidelines ›

PAHO · unchanged

Newest epi update still 20 Oct (dengue/chikungunya)

No newer epidemiological alert or update than 20 October 2026 on the alerts landing this morning.

PAHO alerts ›

SAPG · unchanged

No new dated AMS update in window

Homepage and latest-updates index checked; no November-dated prescribing guidance item identified.

SAPG › · Latest updates ›

Carried (already reported — not new)

UKHSA · flu/COVID · carried

Week 45 flu above baseline — unchanged

No week 46 report yet. Reminder only: influenza above baseline; positivity 7.6%; hospital admissions 2.83 per 100,000 (data to week 44 / report dated 5 Nov).

Week 45 ›

MHRA · medicines · carried

Class 4: Sandoz Co-Amoxiclav oral suspension EL(26)A/46

Still the newest infection-relevant alert (5 Nov), alongside the Class 3 Tropicamide recall. No newer medicine or device alert dated 6–8 Nov.

Co-Amoxiclav alert ›

UK SMI · HCV · carried

V 5 Laboratory diagnosis of hepatitis C virus (issue 8)

Still current; issued bulletin 5 Nov. No newer SMI this morning. The UK SMI news listing page still shows older “under review” wording for V 5 and should not be treated as the latest status.

V 5 PDF ›

WHO · DON624 · carried

Yellow fever — WHO African Region (6 Nov)

Unchanged: 67 confirmed cases / 18 deaths in nine countries, 1 January to 12 October 2026.

DON624 ›

On X

Sunday heavy check: ten searches covering agency accounts (UKHSA, MHRA, ECDC, CIDRAP, WHO, WHO/Europe, WHO/AFRO, CDC), societies (ESCMID, IDSA, e-Bug), AMR/IPC topics, UK vaccines and outbreaks, global outbreaks, GOV.UK/DHSC, and FluTrackers, looking back over the week (2 Nov to this morning). Each item links to the post we read.

UK and agencies

UKHSA: besides the already-used 6 Nov Ebola confirmation @UKHSA › and MMR/mumps note @UKHSA ›, a MenB eligibility retweet said there is less than two months left for people born 1 September 2007 to 31 August 2008 to get a first MenB vaccine @UKHSA › (6 Nov 16:13 GMT); an earlier RT pointed to a first-dose deadline of 31 December @UKHSA ›. VirusWatch on 5 Nov: RSV positivity increased to 2.9% from 1.6% the previous week; COVID-19 decreased slightly @UKHSA › — aligned with the already-published week 45 report, not a new release.

MHRA: #MedSafetyWeek (2–8 Nov) Yellow Card reminder @MHRAgovuk › and a wrapping-up thank-you on 6 Nov @MHRAgovuk ›. No new drug-alert posts in the retrieved week.

DHSC: retweeted @CMO_England urging eligible groups and healthcare workers to take up flu vaccination (2 Nov) @DHSCgovuk ›. No matching @GOVUK posts were returned.

WHO/Europe: on 6 Nov, influenza activity rising in more countries and areas but the season has not yet officially started; COVID-19 activity remains high but is falling in primary care @WHO_Europe ›. A later post reminded health-care workers they can still get influenza vaccine @WHO_Europe ›.

CDC: general respiratory-illness advice for people with chronic conditions (6 Nov) @CDCgov ›. No new CDC measles or Ebola case-count post appeared in the retrieved set.

ECDC: a dedicated from:ECDC_EU search for 2–8 Nov returned no posts.

WHO / WHO AFRO (7 Nov): personnel-wellbeing post from Bunia rather than a new tally @WHOAFRO ›. Both accounts retweeted UN News: “Nearly six months into the Ebola outbreak in the DRC, more than 10,500 people have been infected. Now, two new vaccine…” @WHO › · @WHOAFRO › — that UN tally is older than DON625 (10,668 / 5,198 to 3 Nov), and the two-vaccine point is already carried from 4 Nov.

AMR, IPC and stewardship

IDSA: outpatient stewardship webinar on implementing CDC’s updated Core Elements (session 10 Nov, 2pm ET) @IDSAInfo › (7 Nov 23:31 GMT). A 7 Nov blog post by Sameer Alzaidi on rethinking antimicrobial stewardship during drug shortages @IDSAInfo ›. C. difficile awareness note: about 1 in 9 patients who get a C. diff infection will get it again within 2–8 weeks @IDSAInfo ›.

ESCMID: online AMS-in-LMICs course as part of the AMS Certificate Programme @ESCMID › (7 Nov). WAAW webinar series: Part 2 (5 Nov) on stewardship in special populations, co-organised by SHEA, ESGAP and TAE @ESCMID ›.

e-Bug: Creative Challenge for World AMR Awareness Week 2026 (dated 22 November) @eBug_UK ›.

CIDRAP: two surveys in which 28% and 27% of respondents said they had exaggerated or fabricated symptoms to get antibiotics for themselves or their child @CIDRAP › (4 Nov; recapped 6 Nov). The paediatric CRE and measles posts from 6 Nov were already in yesterday’s issue. No C. auris-specific posts matched the AMR agency/society query this week.

Outbreaks

England H5N1 (now primary): @animaloutbreaks reported GB’s fifth and sixth poultry cases of the season on 7 Nov near Garstang and Pocklington as HPAI H5N1, citing AIV 2026/24 and 2026/25 @animaloutbreaks › (7 Nov 20:30 GMT). This is now confirmed on the Defra/APHA England situation page (see lead).

DRC Ebola (FluTrackers, unverified): government relay of 67 new Ebola cases and 37 deaths for 5 Nov, plus 12 people (5 confirmed) isolated in a general hospital in North Ubangi because there is no Ebola treatment clinic in the area @FluTrackers › (7 Nov 15:51 GMT). Do not merge with DON625. Separate relays the same afternoon: another nurse killed by Ebola in North Kivu @FluTrackers ›; escape of suspected patients after an ADF attack in Beni @FluTrackers ›; police condemn an attack on the MSF Ebola treatment centre in Beni @FluTrackers ›.

Other FluTrackers relays on 7 Nov (unverified): launch of a cholera vaccination campaign in Équateur targeting nearly 1.5 million people @FluTrackers ›; CDC FluView week 43 — two paediatric deaths associated with seasonal influenza this season reported that week @FluTrackers ›; South Korea MAFRA reports of two HPAI H5N9 outbreaks in poultry and ducks @FluTrackers ›; two measles cases in St. Joseph County, Michigan @FluTrackers ›; multiple USDA H5 wild-bird detections (examples: Utah @FluTrackers ›, Mississippi @FluTrackers ›) and a Washington state provider alert on avian influenza in Yakima County @FluTrackers ›.

Weekly context already used in earlier issues: WHO AFRO on adding two Bundibugyo candidates to Tumaini @WHOAFRO ›; CIDRAP measles and Ebola posts from 5–6 Nov (see yesterday); Kenya government relay of 18 days without a new case @FluTrackers ›.

Unverified: FluTrackers and other news-share accounts were not checked against primary government sources in this run, except the England H5N1 cases (now on the Defra/APHA page) and items already backed by UKHSA, WHO, ECDC or CDC pages above.

What we could not confirm

We want you to know exactly where today’s issue has limits. Journals are intentionally out of remit (Journal Watch). Here are the coverage gaps we couldn’t close, plus reports that weren’t out yet.

SourceIssue
Compilation windowShortened morning cut-off 06:25 Europe/London (GMT) for 07:00 publication — not the nominal 08:10. Late-morning releases after cut-off are not in this issue.
Ebola talliesWHO DON625 (to 3 Nov): 10,668 / 5,198. UKHSA OUM week 44 (to 1 Nov): 10,532 / 5,126. ECDC multi-country page (as of 5 Nov / data to 4 Nov): 10,741 / 5,230. Kenya case-date wording also differs slightly across sitrep 24, ECDC and DON625. Do not merge.
IXCHIQ withdrawalJCVI/DHSC pages state that MHRA withdrew the UK marketing authorisation on 20 October 2026. No separate MHRA withdrawal notice was opened in this run.
Mail Sorter / ID AdvisorInfectious Disease Advisor “Weekly Handoff” (memory: Gmail 1a1b12bfeb4aed4b) still not found in microregistrar2021 or microregistrar searches. The GOV.UK weekly digest was read from the original 7 Nov 09:23 GMT subscription email, not a separate Mail Sorter forward.
MoodleNew 7 Nov row title only (Staph aureus bacteraemia); the Moodle activity page was not opened.
CDCHAN archive Access Denied / 403 again. Official 2026 measles deaths remain printed as 4*; secondary reports of further deaths are not reconciled here. FluTrackers’ FluView week-43 paediatric-death relay was not checked against CDC FluView.
ECDC / ERVISSCDTR still week 42; weeks 43–45 missing. ERVISS landing still dated 9 Oct; dashboard retrieved but no dated summary extracted.
WHO AFRO / DRC primariesExternal Situation Report 24 (data as of 1 Nov: 10,532 / 5,126) is older than DON625; the advertised IRIS PDF returned a DSpace shell, not the file. No sitrep 25 found. DRC MoH homepage had no extractable November totals; inrb.cd SSL/500 failures.
X relaysSunday heavy check (10 searches). FluTrackers DRC daily counts, responder attacks, H5N9 in South Korea, Michigan measles and USDA wild-bird detections remain unverified against primary pages. FluTrackers retrieval mainly covered about 6 Nov 17:42 GMT through 7 Nov 21:18 GMT.
PA measles deathsStill not re-confirmed against a PA DOH primary (carried from yesterday).

Not out yet

  • UKHSA: week 46 flu/COVID-19 report; syndromic week 45 (due 12 Nov); next OUM after week 44; HCAI monthly to October 2026; next England measles epi update (last 15 Oct); HPR after issue 10 (29 Oct).
  • ECDC: CDTR weeks 43–45 (overdue); fresher ERVISS summary.
  • WHO: any DON after 625; revised Ebola rapid risk assessment (DON625 still says under revision); AFRO sitrep 25 with reconciled tallies.
  • CDC: HAN (blocked to us); next national measles weekly refresh (typically 12 Nov).
  • PHS / PHW / HPSC / NI: week 45 respiratory reports (PHS next due 12 Nov; HPSC bulletin says it is currently fortnightly).
  • CIDRAP / PAHO / EUCAST: no CIDRAP items dated 7 or 8 Nov in the ten topic feeds; no PAHO alert after 20 Oct; no EUCAST breakpoint-table release in this window.

Sources

What we checked for this issue. Every link in the issue was retrieved and checked during this run. Journals were not scanned (remit change 5 Nov 2026).

  • Watched UK pages re-checked on the morning of 8 Nov, before 06:25 (flu/COVID collection, syndromic, OUM, HCID, Ebola/Marburg locations, bird flu England plus AIV 2026/24 and 2026/25 case pages, Green Book/ch25, MHRA alerts, UK SMI, NICE, exams, measles collection, HPR vol 20, Salmonella collection)
  • Microregistrar moodlecloud Google Sheet (Index tab), read directly through the Sheets connector — one new row dated 7 Nov (Staph aureus bacteraemia)
  • WHO Disease Outbreak News API + DON625 / DON624 / DON623 pages (no DON after 625)
  • Africa CDC 8 Nov North Kivu statement; WHO AFRO External Situation Report 24 landing page; ECDC multi-country Ebola page
  • JCVI/DHSC chikungunya advice (updated 6 Nov) and UKHSA MenB PGD template v9.0 (added 6 Nov), verified from the GOV.UK weekly health-protection digest that arrived at microregistrar2021@gmail.com on 7 Nov 09:23 GMT
  • Mail (microregistrar2021@gmail.com): GOV.UK weekly digest used for catch-up; no separate Mail Sorter-labelled forward after 06:00 GMT 7 Nov; ID Advisor Handoff not found
  • User-approved daily nine: Public Health Scotland respiratory + week 44 report; Public Health Wales week 44 ARI PDF; NI PHA respiratory surveillance; Ireland HPSC integrated week 44 (headline figures extracted); ECDC ERVISS + erviss.org; EUCAST breakpoints + news; SAPG (+ latest updates); HIS guidelines + news; PAHO epidemiological alerts
  • ECDC CDTR archive; CDC measles data page, travel notices and MMWR homepage (HAN blocked)
  • CIDRAP per-topic feeds (Ebola 64, measles 78, avian flu 49, AMS 48, influenza 69, HAI 81141, COVID-19 178636, pertussis 87, mpox 230556, C. auris 232685) — no items dated 7 or 8 Nov
  • X (Sunday heavy check): ten searches over 2–8 Nov, including agency/society accounts, AMR/IPC, outbreaks and FluTrackers
  • Live site baseline: microregistrar.com/newsletter/ (still the 7 Nov issue) and local 2026-11-07.html

Prepared for microregistrar.com, microregistrar.moodlecloud.com and Infection Institute.

AI-generated newsletterMicroregistrar Infection Newsletter · 8 November 2026, compiled this morning (cut-off 06:25 Europe/London). Journals omitted by remit (Journal Watch). This newsletter is generated by AI. It highlights actionable, high-signal items and does not replace full guideline or primary-source review. Please check the primary source before acting on any item.

Prepared using LLM, Grok

Scroll to Top